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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015935061.1_cds_XP_016480997.1_72379
CDS Infomation

[gene=LOC107802070] [db_xref=GeneID:107802070] [protein=E3 ubiquitin-protein ligase RHF1A-like isoform X2] [protein_id=XP_016480997.1] [location=join(7228..7347,9513..9559,9649..9711,10292..10382,10477..10784,10994..11089,11167..11526,13488..13539)] [gbkey=CDS]
Sequence

ATGGCCAACGATTCGTTAAACTCGCCGCCGATGATCGCCTCGCCGGCCGTCGTTGATGAT
AGCTTTGAGGATGCCTGCAGTATCTGCCTTGAGCCATTTAACTCCGATGATCCTCCTGCT
GTAACAGATTGTAAGCATGAGTATCATTTGCAGTGTATTCTTGAATGGTCTCAGAGAAGC
AAGGAGTGCCCAATTTGTTGGAGGGTTCTTGCGCTGAAGGACCCTGCAAGCCAAGAGCTA
CTAGCTGCAGTGGAGATTGAAAGGAACATGAGGTCAAGGATTAATGTGCGTCATACCAAC
GAAGACGTTGAAACCAACCATGATGCCCCTCAGCAGAATGATTCTGATTTTGAGGAGCGA
ATCATGCGACATTTTGCTGCTGCGACAAGTAGAGTCCGTCTTGTCAACAGAAGGAGAAGA
CAGGCATCATCAGGAATTGGTCCTACACAGGTTGTCCCTTCTGTGCCAGTAGGAGTTAGG
TCAAACCAGATACAGAATAGTGAATCCACTGTACAGCCCCGAGCTTCTGGGTTTACTGGG
GATGGATCTGCTGCTTCTGCAACTTCATCTAGTATTGGGCCTGCATCATCAACAGTTCCT
GCCCATGGAAATGGTCCTTTTAAGCTTAGCCAACCGCCAACTTATGGCCCCCAGGGGTCA
AGCTCATCCGAGTTTCTTGCATTTTCTGAATCTATAAAATCGAAATGGTCTGCTGCTTCA
GCGAGGTATAAGGAATCAATCTCAAAAGGTACTCGTGGTTTTAAGGAAAAGTTATTATCA
CGCAACACCTCTGTCAAAGATTTTGGCAAAGAAGTTCAGCGTGAGATGAGTGCTGGAATA
GCTAGCGTTACAAGAATGATTGAACGACTTGATCTTACTTCAAAACGTCCAGGAGCTTCT
GAACCATTATCTGCATGTACCATGGGTACCTCAAACTTTCCTAGTAGAGGAGTGTGTGAG
CAAGGAAATGTGACATTTCAATCGCATGATAGTTGCATAAAGAATTCTACAATTGAAGTA
ACTCCTACCGCTCCCTCATTGATCTCCAACACCAACACTGGCCAAATGGAAATTTTCTTA
GACAGAACGGAAACTGATGCTGCAACCCTATCGAAGTCAAGAATAAATGGTGCCTGA

Peptide Sequence

PEP ID

XP_016480997.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase RHF1A-like isoform X2 [Nicotiana tabacum]
Sequence

MANDSLNSPPMIASPAVVDDSFEDACSICLEPFNSDDPPAVTDCKHEYHLQCILEWSQRS
KECPICWRVLALKDPASQELLAAVEIERNMRSRINVRHTNEDVETNHDAPQQNDSDFEER
IMRHFAAATSRVRLVNRRRRQASSGIGPTQVVPSVPVGVRSNQIQNSESTVQPRASGFTG
DGSAASATSSSIGPASSTVPAHGNGPFKLSQPPTYGPQGSSSSEFLAFSESIKSKWSAAS
ARYKESISKGTRGFKEKLLSRNTSVKDFGKEVQREMSAGIASVTRMIERLDLTSKRPGAS
EPLSACTMGTSNFPSRGVCEQGNVTFQSHDSCIKNSTIEVTPTAPSLISNTNTGQMEIFL
DRTETDAATLSKSRINGA

Transcript Sequence

Gene sequence data has not been registered.